The pathway heatmap is an appealing visualization to clearly shows how the expression of each pathway gene compares to the others. It is generated when you click a pathway or gene set name in the “Gene Set Enrichment” panel at the result page. An example output is shown below The pathway heatmap values are calculated through a series of steps: The fitted model for each gene is evaluated across the range of doses in the uploaded data. The resulting modeled expression values are normalized
Heat map of changed pathways after 24 and 48 h of fasting in
Heatmap analysis. Blue color indicates low intensity and red color
Dose-response metabolomics and pathway sensitivity to map
Functional Heatmap: an automated and interactive pattern
Effects of low doses of methylmercury (MeHg) exposure on
Using Heatmaps
Heat map of gene families in important pathways generated with R
Nextcast: A software suite to analyse and model toxicogenomics
Effects of low doses of methylmercury (MeHg) exposure on
Heatmap of the fold change of SCMs between YF-6 and GF-6. The
Dose-response metabolomics and pathway sensitivity to map